BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003H11SP1|AL425207
(991 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1672 1951 0.0
3x_Contig7 387 e-107
>3x_Contig1672
Length = 13609
Score = 1951 bits (983), Expect = 0.0
Identities = 988/991 (99%)
Strand = Plus / Minus
Query: 1 ataccatggaatcacttcaccttaccaactgcttgcagccaatggggtatacttccaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5839 ataccatggaatcacttcaccttaccaactgcttgcagccaatggggtatacttccaata 5780
Query: 61 actctacccatgctaccggaattactagcatgagtaatgcttcaaatggtacttttgcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5779 actctacccatgctaccggaattactagcatgagtaatgcttcaaatggtacttttgcta 5720
Query: 121 acattactagtacctcaaccaagcgcgttgatagcaacggcagcagcggtaagactgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5719 acattactagtacctcaaccaagcgcgttgatagcaacggcagcagcggtaagactgaac 5660
Query: 181 cactttgtgaaagtaatggaaccactgttatttcaggtttgtccgcggaagacggaatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5659 cactttgtgaaagtaatggaaccactgttatttcaggtttgtccgcggaagacggaatac 5600
Query: 241 tcagtactccatctgctcctccagcagtatctgtacctgtccttagttcaccgcaactat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5599 tcagtactccatctgctcctccagcagtatctgtacctgtccttagttcaccgcaactat 5540
Query: 301 tttcgacaaaatgcttccgtgataacggcttcagtcccgtgtggaatgcgtcgttcgagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5539 tttcgacaaaatgcttccgtgataacggcttcagtcccgtgtggaatgcgtcgttcgagt 5480
Query: 361 gtacacttacaaacactacgttcaacttcgtgcggtttacagtcaagaactccacgcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5479 gtacacttacaaacactacgttcaacttcgtgcggtttacagtcaagaactccacgcaaa 5420
Query: 421 ctatcgcaacaacgtgtgttcggttgaattatttgaagcaagggtataggcacttaccgt 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5419 ctatcgcaacaacgtgtgtacggttgaattatttgaagcaagggtataggcacttaccgt 5360
Query: 481 tgtacaacataaaaggggagaagttcatattctccactctattcatacgctacaaagagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5359 tgtacaacataaaaggggagaagttcatattctccactctattcatacgctacaaagagg 5300
Query: 541 aacttctaawatggtgattggcgcccaacatacacaacttacataaactcattaagcagc 600
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5299 aacttctaaaatggtgattggcgcccaacatacacaacttacataaactcattaagcagc 5240
Query: 601 gctaattaaacgataattccagtatataacattcaatactaatgaactattgtttaatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5239 gctaattaaacgataattccagtatataacattcaatactaatgaactattgtttaatca 5180
Query: 661 gttccattcactcgataatagaaaactttccaaggccgttctctattttatagcttcacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5179 gttccattcactcgataatagaaaactttccaaggccgttctctattttatagcttcacg 5120
Query: 721 tcttatttcgcatcgaggatttcgcgtttcctatacttagcggaaatttggcgggtctca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5119 tcttatttcgcatcgaggatttcgcgtttcctatacttagcggaaatttggcgggtctca 5060
Query: 781 aaacttaagaaaaagtgtcatcaggtattttataaaagaacaataggatcaaaatcttta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5059 aaacttaagaaaaagtgtcatcaggtattttataaaagaacaataggatcaaaatcttta 5000
Query: 841 ctttacttatcttaaggtgtctgaccaggaacactttacatagagcctgccacccaacca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4999 ctttacttatcttaaggtgtctgaccaggaacactttacatagagcctgccacccaacca 4940
Query: 901 agatgatacaacacagatctccactgaagaagagagccgttctgacgtcaaagaacgtaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4939 agatgatacaacacagatctccactgaagaagagagccgttctgacgtcaaagaacgtaa 4880
Query: 961 acataataagcactgggractcgataacaaa 991
||||||||||||||||| |||||||||||||
Sbjct: 4879 acataataagcactgggaactcgataacaaa 4849
>3x_Contig7
Length = 746
Score = 387 bits (195), Expect = e-107
Identities = 196/197 (99%)
Strand = Plus / Plus
Query: 795 gtgtcatcaggtattttataaaagaacaataggatcaaaatctttactttacttatctta 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtcatcaggtattttataaaagaacaataggatcaaaatctttactttacttatctta 60
Query: 855 aggtgtctgaccaggaacactttacatagagcctgccacccaaccaagatgatacaacac 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtgtctgaccaggaacactttacatagagcctgccacccaaccaagatgatacaacac 120
Query: 915 agatctccactgaagaagagagccgttctgacgtcaaagaacgtaaacataataagcact 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatctccactgaagaagagagccgttctgacgtcaaagaacgtaaacataataagcact 180
Query: 975 gggractcgataacaaa 991
||| |||||||||||||
Sbjct: 181 gggaactcgataacaaa 197
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5593
Number of Sequences: 1807
Number of extensions: 5593
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 2
length of query: 991
length of database: 10,358,551
effective HSP length: 16
effective length of query: 975
effective length of database: 10,329,639
effective search space: 10071398025
effective search space used: 10071398025
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)